Publications by the researcher in collaboration with Fernando Carazo (11)

2022

  1. EventPointer 3.0: flexible and accurate splicing analysis that includes studying the differential usage of protein-domains

    NAR Genomics and Bioinformatics, Vol. 4, Núm. 3

  2. Explainable artificial intelligence for precision medicine in acute myeloid leukemia

    Frontiers in Immunology, Vol. 13

  3. Identifying Lethal Dependencies with HUGE Predictive Power

    Cancers, Vol. 14, Núm. 13

  4. SOX9 Triggers Different Epithelial to Mesenchymal Transition States to Promote Pancreatic Cancer Progression

    Cancers, Vol. 14, Núm. 4

2020

  1. Drugsniper, a tool to exploit loss-of-function screens, identifies CREBBP as a predictive biomarker of VOLASERTIB in small cell lung carcinoma (SCLC)

    Cancers, Vol. 12, Núm. 7, pp. 1-18

  2. ISOGO: Functional annotation of protein-coding splice variants

    Scientific Reports, Vol. 10, Núm. 1

2019

  1. Integration of CLIP experiments of RNA-binding proteins: A novel approach to predict context-dependent splicing factors from transcriptomic data

    BMC Genomics, Vol. 20, Núm. 1

  2. Supporting data for "TranscriptAchilles: a genome-wide platform to predict isoform biomarkers of gene essentiality in cancer"

    GigaScience Database

  3. TranscriptAchilles: A genome-wide platform to predict isoform biomarkers of gene essentiality in cancer

    GigaScience, Vol. 8, Núm. 4

2018

  1. Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm

    BMC Genomics, Vol. 19, Núm. 1

  2. Upstream analysis of alternative splicing: A review of computational approaches to predict context-dependent splicing factors

    Briefings in Bioinformatics, Vol. 20, Núm. 4, pp. 1358-1375