Sistemas Microfisiológicos y Biología Cuantitativa
Masaryk University
Brno, República ChecaMasaryk University-ko ikertzaileekin lankidetzan egindako argitalpenak (15)
2023
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The Cell Tracking Challenge: 10 years of objective benchmarking
Nature Methods, Vol. 20, Núm. 7, pp. 1010-1020
2019
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3-D quantification of filopodia in motile cancer cells
IEEE Transactions on Medical Imaging, Vol. 38, Núm. 3, pp. 862-872
2018
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Segmentation of actin-stained 3D fluorescent cells with filopodial protrusions using convolutional neural networks
Proceedings - International Symposium on Biomedical Imaging
2017
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An objective comparison of cell-tracking algorithms
Nature Methods, Vol. 14, Núm. 12, pp. 1141-1152
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Characterization of three-dimensional cancer cell migration in mixed collagen-Matrigel scaffolds using microfluidics and image analysis
PLoS ONE, Vol. 12, Núm. 2
2015
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Cell tracking accuracy measurement based on comparison of acyclic oriented graphs
PLoS ONE, Vol. 10, Núm. 12
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Characterization of the role of collagen network structure and composition in cancer cell migration
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS
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Quantification of the 3D collagen network geometry in confocal reflection microscopy
Proceedings - International Conference on Image Processing, ICIP
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Toward a morphodynamic model of the cell: Signal processing for cell modeling
IEEE Signal Processing Magazine, Vol. 32, Núm. 1, pp. 20-29
2014
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A benchmark for comparison of cell tracking algorithms
Bioinformatics, Vol. 30, Núm. 11, pp. 1609-1617
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Objective comparison of particle tracking methods
Nature Methods, Vol. 11, Núm. 3, pp. 281-289
2013
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Automatic quantification of filopodia-based cell migration
Proceedings - International Symposium on Biomedical Imaging
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Segmentation and shape tracking of whole fluorescent cells based on the Chan-Vese model
IEEE Transactions on Medical Imaging, Vol. 32, Núm. 6, pp. 995-1006
2009
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A two-phase segmentation of cell nuclei using fast level set-like algorithms
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
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Segmentation of touching cell nuclei using a two-stage graph cut model
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)