Francisco Javier
Planes Pedreño
Catedrático de Universidad
Brunel University London
Uxbridge, Reino UnidoBrunel University London-ko ikertzaileekin lankidetzan egindako argitalpenak (11)
2015
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Advances in network-basedmetabolic pathway analysis and gene expression data integration
Briefings in Bioinformatics, Vol. 16, Núm. 2, pp. 1-15
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TreeEFM: Calculating elementary flux modes using linear optimization in a tree-based algorithm
Bioinformatics, Vol. 31, Núm. 6, pp. 897-904
2014
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Refining carbon flux paths using atomic trace data
Bioinformatics, Vol. 30, Núm. 7, pp. 975-980
2013
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Integrating gene and protein expression data with genome-scale metabolic networks to infer functional pathways
BMC Systems Biology, Vol. 7
2011
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Exploring the connectivity structure in metabolic networks: Going beyond graphs via discrete optimization
IEEE Workshop on Statistical Signal Processing Proceedings
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Path finding methods accounting for stoichiometry in metabolic networks
Genome Biology, Vol. 12, Núm. 5
2009
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An optimization model for metabolic pathways
Bioinformatics, Vol. 25, Núm. 20, pp. 2723-2729
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Computing the shortest elementary flux modes in genome-scale metabolic networks
Bioinformatics, Vol. 25, Núm. 23, pp. 3158-3165
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Path finding approaches and metabolic pathways
Discrete Applied Mathematics, Vol. 157, Núm. 10, pp. 2244-2256
2008
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A critical examination of stoichiometric and path-finding approaches to metabolic pathways
Briefings in Bioinformatics, Vol. 9, Núm. 5, pp. 422-436
2007
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Recovering metabolic pathways via optimization
Bioinformatics, Vol. 23, Núm. 1, pp. 92-98