Publications in collaboration with researchers from Centro de Investigación Médica Aplicada (21)

2022

  1. BOSO: A novel feature selection algorithm for linear regression with high-dimensional data

    PLoS Computational Biology, Vol. 18, Núm. 5

  2. Explainable artificial intelligence for precision medicine in acute myeloid leukemia

    Frontiers in Immunology, Vol. 13

  3. Identifying Lethal Dependencies with HUGE Predictive Power

    Cancers, Vol. 14, Núm. 13

2020

  1. Drugsniper, a tool to exploit loss-of-function screens, identifies CREBBP as a predictive biomarker of VOLASERTIB in small cell lung carcinoma (SCLC)

    Cancers, Vol. 12, Núm. 7, pp. 1-18

2018

  1. Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm

    BMC Genomics, Vol. 19, Núm. 1

  2. The aberrant splicing of BAF45d links splicing regulation and transcription in glioblastoma

    Neuro-Oncology, Vol. 20, Núm. 7, pp. 930-941

  3. Upstream analysis of alternative splicing: A review of computational approaches to predict context-dependent splicing factors

    Briefings in Bioinformatics, Vol. 20, Núm. 4, pp. 1358-1375

2017

  1. In-silico gene essentiality analysis of polyamine biosynthesis reveals APRT as a potential target in cancer

    Scientific Reports, Vol. 7, Núm. 1

2016

  1. A large-scale analysis of alternative splicing reveals a key role of QKI in lung cancer

    Molecular Oncology, Vol. 10, Núm. 9, pp. 1437-1449

  2. EventPointer: An effective identification of alternative splicing events using junction arrays

    BMC Genomics, Vol. 17, Núm. 1

2015

  1. Combined clinical and genomic signatures for the prognosis of early stage non-small cell lung cancer based on gene copy number alterations

    BMC Genomics, Vol. 16, Núm. 1

2014

  1. Identification of alternative splicing events regulated by the oncogenic factor SRSF1 in lung cancer

    Cancer Research, Vol. 74, Núm. 4, pp. 1105-1115

  2. Space: An algorithm to predict and quantify alternatively spliced isoforms using microarrays

    Bioinformatics: The Impact of Accurate Quantification on Proteomic and Genetic Analysis and Research (Apple Academic Press), pp. 105-144

2012

  1. Quantification of miRNA-mRNA interactions

    PLoS ONE, Vol. 7, Núm. 2

2011

  1. Genetic and epigenetic modifications of Sox2 contribute to the invasive phenotype of malignant gliomas

    PLoS ONE, Vol. 6, Núm. 10

2010

  1. Development of a novel splice array platform and its application in the identification of alternative splice variants in lung cancer

    BMC Genomics, Vol. 11, Núm. 1

  2. Integrative oncogenomic analysis of microarray data in hematologic malignancies.

    Methods in molecular biology (Clifton, N.J.), Vol. 576, pp. 231-277

2009

  1. FactorY, a bioinformatic resource for genome-wide promoter analysis

    Computers in Biology and Medicine, Vol. 39, Núm. 4, pp. 385-387

2008

  1. SPACE: An algorithm to predict and quantify alternatively spliced isoforms using microarrays

    Genome Biology, Vol. 9, Núm. 2

2007

  1. Identification of a gene-pathway associated with non-alcoholic steatohepatitis

    Journal of Hepatology, Vol. 46, Núm. 4, pp. 708-718