Idoia
Ochoa
Profesional Investigadora
Centro de Investigación Médica Aplicada
Pamplona, EspañaPublicaciones en colaboración con investigadores/as de Centro de Investigación Médica Aplicada (7)
2024
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GeNNius: an ultrafast drug-target interaction inference method based on graph neural networks
Bioinformatics (Oxford, England), Vol. 40, Núm. 1
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NetActivity enhances transcriptional signals by combining gene expression into robust gene set activity scores through interpretable autoencoders
Nucleic Acids Research, Vol. 52, Núm. 9, pp. e44
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Single-cell transcriptional profile of CD34+ hematopoietic progenitor cells from del(5q) myelodysplastic syndromes and impact of lenalidomide
Nature Communications, Vol. 15, Núm. 1
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Whole exome sequencing and machine learning germline analysis of individuals presenting with extreme phenotypes of high and low risk of developing tobacco-associated lung adenocarcinoma
eBioMedicine, Vol. 102
2022
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JIND: Joint integration and discrimination for automated single-cell annotation
Bioinformatics, Vol. 38, Núm. 9, pp. 2488-2495
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SimiC enables the inference of complex gene regulatory dynamics across cell phenotypes
Communications Biology, Vol. 5, Núm. 1
2020
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GPress: A framework for querying general feature format (GFF) files and expression files in a compressed form
Bioinformatics, Vol. 36, Núm. 18, pp. 4810-4812