Publicaciones en las que colabora con Francisco Javier Planes Pedreño (14)

2024

  1. An automated network-based tool to search for metabolic vulnerabilities in cancer

    Nature Communications , Vol. 15, Núm. 1

  2. BN-BacArena: Bayesian network extension of BacArena for the dynamic simulation of microbial communities

    Bioinformatics, Vol. 40, Núm. 5

  3. Extending PROXIMAL to predict degradation pathways of phenolic compounds in the human gut microbiota

    npj Systems Biology and Applications, Vol. 10, Núm. 1

  4. Review and meta-analysis of the genetic Minimal Cut Set approach for gene essentiality prediction in cancer metabolism

    Briefings in Bioinformatics, Vol. 25, Núm. 3

  5. gMCSpy: efficient and accurate computation of genetic minimal cut sets in Python

    Bioinformatics, Vol. 40, Núm. 6

2023

  1. Synthetic lethality in large-scale integrated metabolic and regulatory network models of human cells

    NPJ systems biology and applications, Vol. 9, Núm. 1, pp. 32

2022

  1. A network-based approach to integrate nutrient microenvironment in the prediction of synthetic lethality in cancer metabolism

    PLoS Computational Biology, Vol. 18, Núm. 3

  2. BOSO: A novel feature selection algorithm for linear regression with high-dimensional data

    PLoS Computational Biology, Vol. 18, Núm. 5

  3. Landscape and clinical significance of long noncoding RNAs involved in multiple myeloma expressed fusion transcripts

    American Journal of Hematology

2021

  1. Characterization of complete lncRNAs transcriptome reveals the functional and clinical impact of lncRNAs in multiple myeloma

    Leukemia, Vol. 35, Núm. 5, pp. 1438-1450

  2. Gene expression derived from alternative promoters improves prognostic stratification in multiple myeloma

    Leukemia, Vol. 35, Núm. 10, pp. 3012-3016

2019

  1. Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0

    Nature Protocols, Vol. 14, Núm. 3, pp. 639-702

  2. GMCS: Fast computation of genetic minimal cut sets in large networks

    Bioinformatics, Vol. 35, Núm. 3, pp. 535-537

  3. RMTA: Robust metabolic transformation analysis

    Bioinformatics, Vol. 35, Núm. 21, pp. 4350-4355