Natural antinsense transcripts control LEF1 gene expression

Abstract

Non-coding RNA functions are emerging in the recent years. In this thesis we describe a Natural Antisense Transcript (NAT) that controls the expression of LEF1 transcriptional factor. This LEF1 NAT is transcribed from a promoter present in the first LEF1 intron and undergoes splicing in mesenchymal cells. In epithelial cells, there is no expression of LEF1 NAT. However, in metastable epithelial cells, LEF1 NAT is transcribed and a significant part of it remains unspliced and, contrarily to the spliced NAT, down-regulates the main LEF1 promoter and LEF1 mRNA and protein expression. Moreover, unspliced NAT also down-regulates cell migration and up-regulates Ecadherin expression. Unspliced LEF1 NAT interacts with LEF1 promoter and physically associates with Polycomb Repressive Complex 2 (PRC2) inducing its binding to the LEF1 promoter and trimethylating Lysine 27 in Histone 3. Spliced LEF1 NAT prevents the binding between unspliced LEF1 NAT and LEF1 promoter, inhibiting LEF1 promoter repression. Thus, these results indicate that LEF1 gene expression is finely controlled by splicing of the LEF1 NAT that, when is not processed, recruits PRC2 to LEF1 promoter to inhibit it.