Publications by the researcher in collaboration with Sergio Pérez Burillo (7)

2024

  1. BN-BacArena: Bayesian network extension of BacArena for the dynamic simulation of microbial communities

    Bioinformatics, Vol. 40, Núm. 5

  2. Extending PROXIMAL to predict degradation pathways of phenolic compounds in the human gut microbiota

    npj Systems Biology and Applications, Vol. 10, Núm. 1

  3. q2-metnet: QIIME2 package to analyse 16S rRNA data via high-quality metabolic reconstructions of the human gut microbiota

    Bioinformatics (Oxford, England), Vol. 40, Núm. 11

2022

  1. Prediction of degradation pathways of phenolic compounds in the human gut microbiota through enzyme promiscuity methods

    npj Systems Biology and Applications, Vol. 8, Núm. 1

2021

  1. An extended reconstruction of human gut microbiota metabolism of dietary compounds

    Nature Communications, Vol. 12, Núm. 1

  2. Effect of freezing on gut microbiota composition and functionality for in vitro fermentation experiments

    Nutrients, Vol. 13, Núm. 7

2019

  1. Adaptation of the human gut microbiota metabolic network during the first year after birth

    Frontiers in Microbiology, Vol. 10, Núm. APR