Cancer Center Clínica Universidad de Navarra (CCUN)
Centro clínico de la Universidad de Navarra
University of Illinois at Urbana Champaign
Urbana, Estados UnidosPublikationen in Zusammenarbeit mit Forschern von University of Illinois at Urbana Champaign (34)
2023
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Analysis of Machine Learning Algorithms for USRP-based Smart Chipless RFID Readers
17th European Conference on Antennas and Propagation, EuCAP 2023
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Bayesian Machine Learning Enables Identification of Transcriptional Network Disruptions Associated with Drug-Resistant Prostate Cancer
Cancer research, Vol. 83, Núm. 8, pp. 1361-1380
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Phertilizer: Growing a clonal tree from ultra-low coverage single-cell DNA sequencing of tumors
PLoS Computational Biology, Vol. 19, Núm. 10
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Single-cell dissection of aggression in honeybee colonies
Nature Ecology and Evolution, Vol. 7, Núm. 8, pp. 1232-1244
2022
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JIND: Joint integration and discrimination for automated single-cell annotation
Bioinformatics, Vol. 38, Núm. 9, pp. 2488-2495
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Nanopore quality score resolution can be reduced with little effect on downstream analysis
Bioinformatics Advances, Vol. 2, Núm. 1
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SimiC enables the inference of complex gene regulatory dynamics across cell phenotypes
Communications Biology, Vol. 5, Núm. 1
2021
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An Introduction to MPEG-G: The First Open ISO/IEC Standard for the Compression and Exchange of Genomic Sequencing Data
Proceedings of the IEEE, Vol. 109, Núm. 9, pp. 1607-1622
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Cellular plasticity balances the metabolic and proliferation dynamics of a regenerating liver
Genome Research, Vol. 31, Núm. 4, pp. 576-591
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DZip: Improved general-purpose loss less compression based on novel neural network modeling
Data Compression Conference Proceedings
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Moss enables high sensitivity single-nucleotide variant calling from multiple bulk DNA tumor samples
Nature Communications, Vol. 12, Núm. 1
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mspack: efficient lossless and lossy mass spectrometry data compression
Bioinformatics, Vol. 37, Núm. 21, pp. 3923-3925
2020
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CROMqs: An infinitesimal successive refinement lossy compressor for the quality scores
Journal of Bioinformatics and Computational Biology, Vol. 18, Núm. 6
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Comparison of single and module-based methods for modeling gene regulatory networks
Bioinformatics, Vol. 36, Núm. 2, pp. 558-567
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DZip: Improved general-purpose lossless compression based on novel neural network modeling
Data Compression Conference Proceedings
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GABAC: An arithmetic coding solution for genomic data
Bioinformatics, Vol. 36, Núm. 7, pp. 2275-2277
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GPress: A framework for querying general feature format (GFF) files and expression files in a compressed form
Bioinformatics, Vol. 36, Núm. 18, pp. 4810-4812
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Imaging-AMARETTO: An imaging genomics software tool to interrogate multiomics networks for relevance to radiography and histopathology imaging biomarkers of clinical outcomes
JCO Clinical Cancer Informatics, Vol. 4, pp. 421-435
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VEF: A variant filtering tool based on ensemble methods
Bioinformatics, Vol. 36, Núm. 8, pp. 2328-2336
2019
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AliCo: A New Efficient Representation for SAM Files
Data Compression Conference Proceedings